PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.1449s0006.2.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

VOZ

Protein Properties

Length: 474aa MW: 52941.3 Da PI: 5.976

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.1449s0006.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434	2.1e-133	200	416	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+la+neg+pg+tpvlrp+gi+lkd+llfaal akv+gk+vgipecegaat+kspw Kalax.1449s0006.2.p 200 PPPSAFLGPKCALWDCPRPAQGPDWCQDYCSSFHAALAFNEGPPGMTPVLRPNGIGLKDSLLFAALAAKVHGKDVGIPECEGAATTKSPW 289 89************************************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdls+legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++efgglkrsyymdpqp++++ewhlyeyei+++d + Kalax.1449s0006.2.p 290 NAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINEFGGLKRSYYMDPQPLKHYEWHLYEYEISKCDIC 379 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelkl+d+kk +kgk +dsladlqk++grlta Kalax.1449s0006.2.p 380 ALYRLELKLADGKKIPKGKTPSDSLADLQKQMGRLTA 416 *********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MGKGSRSNCK STSHRMFRDK AKNKVDDLQG IFADLQYARK ESRTTDAALL EEQVHQMLRE 60 WRSELNEPSP ATSLQGGSLG SFSSDICRLL QLYEEEEDDA TSRLAAPKTE PDAAHSVQAQ 120 DVAIEQVTLT NQLPQEHSYQ LGNNCKSSMA EMHNMGHNNL GGVESREFQL HQDFEKSFYA 180 LPEEDVNVMP NADFLPNICP PPSAFLGPKC ALWDCPRPAQ GPDWCQDYCS SFHAALAFNE 240 GPPGMTPVLR PNGIGLKDSL LFAALAAKVH GKDVGIPECE GAATTKSPWN APELFDLSVL 300 EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVINEFGGL KRSYYMDPQP 360 LKHYEWHLYE YEISKCDICA LYRLELKLAD GKKIPKGKTP SDSLADLQKQ MGRLTAEFPS 420 DHKFSAKGRI KIYPKDSHGH FATNQAAHAS DSGAGNGSAP YYLVDNLDEY FLT*

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MGKGSRSNCK STSHRMFRDK AKNKVDDLQG IFADLQYARK ESRTTDAALL EEQVHQMLRE  60
WRSELNEPSP ATSLQGGSLG SFSSDICRLL QLYEEEEDDA TSRLAAPKTE PDAAHSVQAQ  120
DVAIEQVTLT NQLPQEHSYQ LGNNCKSSMA EMHNMGHNNL GGVESREFQL HQDFEKSFYA  180
LPEEDVNVMP NADFLPNICP PPSAFLGPKC ALWDCPRPAQ GPDWCQDYCS SFHAALAFNE  240
GPPGMTPVLR PNGIGLKDSL LFAALAAKVH GKDVGIPECE GAATTKSPWN APELFDLSVL  300
EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVINEFGGL KRSYYMDPQP  360
LKHYEWHLYE YEISKCDICA LYRLELKLAD GKKIPKGKTP SDSLADLQKQ MGRLTAEFPS  420
DHKFSAKGRI KIYPKDSHGH FATNQAAHAS DSGAGNGSAP YYLVDNLDEY FLT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002273268.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	F6HM51	0.0	F6HM51_VITVI; Uncharacterized protein
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Kalax.1449s0006.2.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]