PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1717s0001.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 383aa    MW: 42137.5 Da    PI: 4.4238
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1717s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.51.3e-1925575129
                  NAM  75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                          nrat+ gyWk+tg+d++++  ++++vg+ ktL++++grap+g++tdWvmheyrle
  Kalax.1717s0001.1.p   2 NRATEYGYWKTTGSDRPIKY-NHRTVGMIKTLIYHEGRAPHGNRTDWVMHEYRLE 55 
                          8*******************.999*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.995177IPR003441NAC domain
PfamPF023654.6E-8254IPR003441NAC domain
SuperFamilySSF1019412.48E-26277IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MNRATEYGYW KTTGSDRPIK YNHRTVGMIK TLIYHEGRAP HGNRTDWVMH EYRLEDEDLS  60
KSGVAQDAYV ICKIFLKSGP GPRSTQHLFK EEDWIDGDDD GTSLDECPLN GLSFPSALNL  120
INPDSSTVTN PCNPGSISID ASIEAGPSAS VTFLKAADSD KYNILLSELP NSPKEFPSLM  180
NTQKDVSLSE LPQASNSNVY EMQTSTNYKQ CQVGMHGNPC SFPELSNDAM CSTWEMHGGD  240
NHMLPSRSHR EEVEHLPDIN RGGMVQSSTL AHPDVYNELG NLFDLGVDAL NDDSFIELDD  300
LSNPLGDEPH WSHLIPSDDL LSGLDPHLNR VSSFHPVDEY GGSFCDNAPA ESLLLPGSSL  360
GSIGHTDIQQ KVSFLISYKN VY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-1527888169Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-37NAC domain containing protein 2