PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1870s0001.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HB-other
Protein Properties Length: 281aa    MW: 31357.8 Da    PI: 6.0993
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1870s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.81.1e-096382254
                         SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54
                         ++yp+ ++++ LAk+ gLt +qV++WF N R +
  Kalax.1870s0001.1.p  6 HPYPKDSDKQMLAKQAGLTRSQVSNWFINARVR 38
                         89*****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007112.617142IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.0E-21148IPR009057Homeodomain-like
CDDcd000865.71E-10243No hitNo description
SuperFamilySSF466893.12E-13249IPR009057Homeodomain-like
PfamPF059202.9E-16238IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
FEHFLHPYPK DSDKQMLAKQ AGLTRSQVSN WFINARVRLW KPMVEEMYNE EIKEQENHES  60
TDKTGISGNN NAKAYASKVP THDNISFKNV SPEDTGATAA AKSDSVSPGR LRNQNTGFSL  120
VGSSELEGIS EMSPKRQRTN HLMINPTDSF QSNMEMKSIH ASNEHVLMQF GIERQTRDDY  180
SLMAAGPFGS CPMEEINQFD SSHQYQPRFS GNGGVSLTLG LTDTLFPNQN MRRMDTGEAT  240
EFGTINNNPN PARTTSTAYE SINIQNPKRF PVQLLPDFVA *
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6228570.0EU622857.1 Kalanchoe x houghtonii BEL1 (Bel1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018809867.18e-88PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_018809868.18e-88PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_018809869.18e-88PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_018809870.18e-88PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_018809871.18e-88PREDICTED: BEL1-like homeodomain protein 1
TrEMBLB2MV690.0B2MV69_9MAGN; BEL1
STRINGPOPTR_0006s21950.11e-85(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-40BEL1-like homeodomain 1