PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1991s0001.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 101aa    MW: 11601.4 Da    PI: 9.701
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1991s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.43.7e-1639100266
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkakl 66 
                          fY +YA+++GF vr+ +  +s+++g+i+ r+f C++eg+++++kk      +++++ r gCka++
  Kalax.1991s0001.1.p  39 FYGRYAQRMGFVVRVMACWRSEKDGRIIARRFGCNREGHKRPNKKL---GIKPKKSFRGGCKAMV 100
                          9*****************************************9998...99************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.9E-1439100IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MESDAFTPAL AEEEEEVAAQ QWEPLVGMEF DSEEAAKLFY GRYAQRMGFV VRVMACWRSE  60
KDGRIIARRF GCNREGHKRP NKKLGIKPKK SFRGGCKAMV R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010526071.11e-27PREDICTED: protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A1J3CN943e-25A0A1J3CN94_NOCCA; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
TrEMBLA0A1J3EPX23e-25A0A1J3EPX2_NOCCA; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
TrEMBLA0A1J3GC843e-25A0A1J3GC84_NOCCA; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
TrEMBLA0A1J3JBK43e-25A0A1J3JBK4_NOCCA; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
STRINGXP_010526071.15e-27(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-27FAR1 family protein