PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os06g50480.1
Common NameOs06g0719500
Organism
Oryza sativa subsp. japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 155aa    MW: 16801.8 Da    PI: 6.5255
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os06g50480.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1491.4e-1595143351
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       +++r++r+++NRe+A rsR+RK+a++eeLe++v  L   N  Lkk+ +e
  LOC_Os06g50480.1  95 DDRRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCKE 143
                       589*************************************888877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-893153IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.42795140IPR004827Basic-leucine zipper domain
PfamPF001703.3E-1396143IPR004827Basic-leucine zipper domain
CDDcd147078.17E-1897143No hitNo description
SuperFamilySSF579591.69E-1197143No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-1397143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009047anatomystem
PO:0007010developmental stagewhole plant fruit ripening stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MANYHHQEYY QMAAAAAVAW PREPDSPQLS IMSGCSSLFS ISTLRDDDDG GGVRLAGAAL  60
PATPVSLAGI AGGASTPGGD EVDMEVRQQS GGSGDDRRTI RMMRNRESAL RSRARKRAYV  120
EELEKEVRRL VDDNLNLKKQ CKEGSGMRED IVCR*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.559150.0callus| flower| leaf| root| seed
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasC7J3L3
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os06g50480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs06g50480
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2431440.0AK243144.1 Oryza sativa Japonica Group cDNA, clone: J100032B03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.11e-102ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLC7J3L31e-109C7J3L3_ORYSJ; Os06g0719500 protein
TrEMBLQ8SB191e-109Q8SB19_ORYSA; Putative transcription factor
STRINGOS06T0719500-001e-101(Oryza sativa)
STRINGOS06T0720900-011e-102(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Representative plantOGRP9528513
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-06ABA-responsive element binding protein 3