PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os06g50830.2
Common NameOs06g0724000, OSNPB_060724000
Organism
Oryza sativa subsp. japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 151aa    MW: 16633.9 Da    PI: 9.0051
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os06g50830.2genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.5e-0895119327
                       XXCHHHCHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkae 27 
                       +++r++r+++NRe+A rsR+RK+ +
  LOC_Os06g50830.2  95 DDRRTIRMMRNRESALRSRARKRVR 119
                       589*******************865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-593120No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009066anatomyanther
PO:0001004developmental stageanther development stage
PO:0007130developmental stagesporophyte reproductive stage
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MANYHHQEYY QMAAAAAVAW PREPDSPQLS IMSGCSSLFS ISTLRDDDDG GGVRLAGAAL  60
PATPVSLAGI AGGASTPGGD EVDMEVRQQS GGSGDDRRTI RMMRNRESAL RSRARKRVRT  120
YIQYQIRIII RIILQYLCTY VFITYGMNYY *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.559150.0callus| flower| leaf| root| seed
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasA0A0P0X170
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os06g50830.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs06g50830
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2892590.0AK289259.1 Oryza sativa Japonica Group cDNA, clone: J100084H14, full insert sequence.
GenBankAP0060650.0AP006065.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16.
GenBankAP0072310.0AP007231.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0535F09.
GenBankAP0149620.0AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.18e-77ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0P0X1701e-106A0A0P0X170_ORYSJ; Os06g0724000 protein
STRINGOS06T0719500-004e-76(Oryza sativa)
STRINGOS06T0720900-012e-76(Oryza sativa)