PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os07g03220.1
Common NameOJ1007_H09.109, Os07g0124300, OSNPB_070124300, P0474G09.109
Organism
Oryza sativa subsp. japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 192aa    MW: 19771 Da    PI: 11.2135
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os07g03220.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.23.5e-1372122151
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       e++++r rrk++NRe+ArrsR+R+++++eeLe+ ++eL ae++aL+++l+ 
  LOC_Os07g03220.1  72 EERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDA 122
                       68899*******************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-1071123No hitNo description
SMARTSM003382.1E-772136IPR004827Basic-leucine zipper domain
PfamPF001701.8E-872122IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01374137IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-776127No hitNo description
PROSITE patternPS0003607994IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MPLDFGLPDM DVGFGLFGVD AAAFGYDGVA SDAAAGLSPV VGAGDGSGGG GDVLLYCDGG  60
GGGGGGGEDG EEERRRRLRR KISNRESARR SRARRRQRVE ELERAADELR AERRALASRL  120
DATARRALAV RGANARHHAE AGVLRRRLGE AQRNAAVLIG LSRLLRSTAN GAHGGAAPAQ  180
LSNGGVASLM T*
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasQ7XIZ3
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os07g03220.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs07g03220
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037020.0AP003702.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1007_H09.
GenBankAP0053090.0AP005309.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0474G09.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8B6V51e-124B8B6V5_ORYSI; Uncharacterized protein
TrEMBLQ7XIZ31e-124Q7XIZ3_ORYSJ; Os07g0124300 protein
STRINGOS07T0124300-001e-125(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1683199