PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR02G17460.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 484aa    MW: 53518.3 Da    PI: 4.6611
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR02G17460.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3364.12.6e-111813512265
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn..........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                      +lkkrmwkdqmll++l++r     +++ a +g+++s+          +++ + rrk+m raQDg+L++Mlk+me+cna+GfvYg i+e g+p++
  LPERR02G17460.1  81 DLKKRMWKDQMLLMKLEGRAGITAAAAAARAGTSSSQegrdedqeeeTPEVRCRRKAMLRAQDGVLRHMLKMMEACNARGFVYGVIDEAGEPMS 174
                      9******************998877777666666666788999888899999****************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
             EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                      g+sdsLr+WWk++v+fdr+gp+a++    +   ++ + +l     s   +l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWPtG+e+
  LPERR02G17460.1 175 GSSDSLRGWWKDNVSFDRAGPMALIGPSGETSPQATAAGL----ASCLYRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWPTGDEA 264
                      **************************95544444444444....567899******************************************** PP

                      HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS
             EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265
                      wwg++g ++++qg+ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq+kmsakes+++++vl+qee++ ++++ + +
  LPERR02G17460.1 265 WWGSQGeMQAHQGAPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESDTWSKVLRQEEALNRRLKHSLQ 351
                      *****************************************************************************9988876643 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.8E-11681340No hitNo description
Gene3DG3DSA:1.10.3180.102.1E-64215349IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-56219343IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MATRSRTKKR SDHDHFRDRD STRHPFSSEE YYWGTMDQRE EERGRGDGGD RDRDDAPEPE  60
VEQEAEPSDS ESGAESIEIS DLKKRMWKDQ MLLMKLEGRA GITAAAAAAR AGTSSSQEGR  120
DEDQEEETPE VRCRRKAMLR AQDGVLRHML KMMEACNARG FVYGVIDEAG EPMSGSSDSL  180
RGWWKDNVSF DRAGPMALIG PSGETSPQAT AAGLASCLYR LQDIQDSTLG SVLSALIQHC  240
EPPQRSFPLE RGLAPPWWPT GDEAWWGSQG EMQAHQGAPP YRKPHDLKKA WKISLLSAVI  300
KHMSPRFDQM RKLVWQSKRL QQKMSAKESD TWSKVLRQEE ALNRRLKHSL QITPLDGDDD  360
DDDEDGLENV VRGAQDKRKR EFTRSGSGSS SGSGSGAGKF ARPSDGELAV AGEEGRSPIN  420
ELMELSYSCL EGVAASGGEI GEGDVAGLVP PPYLVGVDEV AQDVLFDLIG SCPEVDDVLR  480
FMDE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-492163461130Protein ETHYLENE INSENSITIVE 3
4zds_B2e-492163461130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR02G17460.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015625091.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9SLH03e-92EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A0D9VHF80.0A0A0D9VHF8_9ORYZ; Uncharacterized protein
STRINGLPERR02G17460.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-90EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]