PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR03G08920.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 329aa    MW: 35911.3 Da    PI: 9.8735
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR03G08920.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.24.7e-20245307163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l++++ +l+se+
  LPERR03G08920.1 245 ERELKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQEKCNNLTSEN 307
                      89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.5E-15151IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.7E-15240303No hitNo description
PfamPF001706.3E-18245307IPR004827Basic-leucine zipper domain
SMARTSM003381.4E-19245309IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.576247310IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-9248304No hitNo description
CDDcd147021.42E-21250301No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MTPPGYFHPN VAPSPQGHPY MWGPQMMPPY GTPPPYAAMY AQGTPYQQAP MLPGSHPYNP  60
YPGQSPNGTV QTPTSAGGTE TDKSSKSKRK TPLKKSKGSL LNLDVDATKN KKTPTKPSAS  120
SSNEARVEVE VLLKEAVQIP KGSRTKDGSE HGQSNDASNK GATVQSSAAE PVQASPGPVV  180
LNPMMPYWPV PPPMAGPTTG VNMGMDYWGT PTSVPMHNKV VAAPTSTPSS NSRDIVLSDP  240
AIQDERELKR QKRKQSNRES ARRSRLRKQA EWEEVANRAD LLKQENSSLK EELKQLQEKC  300
NNLTSENTTL HGKLKELEGE KSNGNWYKE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261267RRSRLRK
2261268RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR03G08920.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0665630.0AK066563.1 Oryza sativa Japonica Group cDNA clone:J013071G08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632857.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632859.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632860.10.0bZIP transcription factor 16 isoform X1
RefseqXP_015632861.10.0bZIP transcription factor 16 isoform X1
RefseqXP_025879940.10.0bZIP transcription factor 16 isoform X1
RefseqXP_025879941.10.0bZIP transcription factor 16 isoform X1
TrEMBLA0A0D9VRQ30.0A0A0D9VRQ3_9ORYZ; Uncharacterized protein
STRINGLPERR03G08920.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.18e-36basic region/leucine zipper transcription factor 16