PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR03G23380.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 133aa    MW: 14412.7 Da    PI: 8.2249
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR03G23380.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.45.3e-2249106258
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE.EEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv.veitYegeHnh 58 
                      +Dgy+W+KYGqK +k+ +  rsY+rC  ++C +kkkve   +dp++ + ++Y g H+h
  LPERR03G23380.1  49 EDGYEWKKYGQKFIKNIQKNRSYFRCRDQRCGAKKKVEWHPHDPTLnLRVVYDGAHHH 106
                      7*******************************************97479********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.31543109IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.3E-2443109IPR003657WRKY domain
SuperFamilySSF1182902.48E-2144109IPR003657WRKY domain
SMARTSM007741.4E-2148108IPR003657WRKY domain
PfamPF031063.9E-2049106IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MASNSQPNTT AAGGGRGQGD EEKQTPPPET AASAGGGGDD DAVQLVMPED GYEWKKYGQK  60
FIKNIQKNRS YFRCRDQRCG AKKKVEWHPH DPTLNLRVVY DGAHHHGSPS SSSAAAANQY  120
DLSTQYFGGA RSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR03G23380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006651653.12e-66PREDICTED: probable WRKY transcription factor 2
TrEMBLA0A0D9VX282e-95A0A0D9VX28_9ORYZ; Uncharacterized protein
STRINGLPERR03G23380.14e-96(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46350.18e-13WRKY DNA-binding protein 8