PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR03G34140.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 202aa    MW: 22339.2 Da    PI: 6.898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR03G34140.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM484.1e-1512104391
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                      pG+ F+P+d+ l++ yL++k+++++++  + i+++d+y ++P dL +       ++ +++ wyfF++ + ++++ +  +r  ++  W  t + +
  LPERR03G34140.1  12 PGLVFRPSDDKLITLYLRPKITNTPFKN-NLISNADVYCSDPADLVAnhnpapGTQDSSSVWYFFCSPRYTSKRVSSGRR-QRHPAWMITRRMR 103
                      8************************999.89**************7435666655556679*****99887776555555.4668898887766 PP

              NAM  91 e 91 
                      +
  LPERR03G34140.1 104 H 104
                      5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.84310153IPR003441NAC domain
SuperFamilySSF1019412.48E-1611101IPR003441NAC domain
PfamPF023653.9E-812100IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MDADDEMSPD RPGLVFRPSD DKLITLYLRP KITNTPFKNN LISNADVYCS DPADLVANHN  60
PAPGTQDSSS VWYFFCSPRY TSKRVSSGRR QRHPAWMITR RMRHPACGRG KRPPPAASKI  120
SSRRSLWMDH NMGNNNVFSN ATVEQLPCAP AMDLVGGDGD FFQTASGPCM DAEVMERLAA  180
GETVDDILGM SPLVGQDLVQ CF
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR03G34140.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9W1291e-149A0A0D9W129_9ORYZ; Uncharacterized protein
STRINGLPERR03G34140.11e-150(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.25e-10NAC domain containing protein 47