PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR04G11520.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 448aa    MW: 49247.9 Da    PI: 4.9108
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR04G11520.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3362.86.1e-111423402297
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn......ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 
                      +lkkrmwkdqmll++l++r+    + +++ +g +k++       ++ ++rrk+m raQDg+L++Mlk+me+cna+GfvYgi++e+g pv+g+sd
  LPERR04G11520.1  42 DLKKRMWKDQMLLMKLEGRSGGHDGPHSRPIGITKEEeeeesePPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVSGSSD 135
                      8*******************998777777766555555556659999*********************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S-- CS
             EIN3  90 sLraWWkekvefdrngpaaisky...qaknlilsgessl..qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGke 178
                      sLr+WWk++v+fdr+gp+a+s +        ++s +s +   +++ s  h l ++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG e
  LPERR04G11520.1 136 SLRGWWKDDVAFDRAGPTALSSSsgpGMGLHLQSPRSPSasAAAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGGE 229
                      ***********************98733333334333332256789999********************************************* PP

                      HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....X CS
             EIN3 179 lwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....s 266
                       wwg +g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp++++ir+l++qsk+lq+kmsa++ +++++v+ +ee++ ++ + + +     +
  LPERR04G11520.1 230 PWWGLQGeAQASQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQIRKLVWQSKRLQHKMSARDADTWSRVITHEEALSRHAHRSLRlapleE 323
                      *****************************************************************************98876655533332221 PP

                      XXXXXXXXXXXXXXXXXXXXXXXXX.XXXXX CS
             EIN3 267 lrkqspkvtlsceqkedvegkkeskikhvqa 297
                                    +e+++g   ++ +h+ +
  LPERR04G11520.1 324 --------------EEEQQGAPTPRDSHADK 340
                      ..............22233333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.1E-11542306No hitNo description
Gene3DG3DSA:1.10.3180.103.1E-63179315IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.36E-56184309IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MDEKGKAKPD AAAKAAPEQQ QQQEEEFLSD ADSGSESIEI ADLKKRMWKD QMLLMKLEGR  60
SGGHDGPHSR PIGITKEEEE EESEPPEARY RRKAMLRAQD GVLRHMLKMM EACNARGFVY  120
GIVDESGVPV SGSSDSLRGW WKDDVAFDRA GPTALSSSSG PGMGLHLQSP RSPSASAAAA  180
ASFLHGLLDI QDSTLGSLLS ALIQHCEPPQ RSFPLDRGLP PPWWPTGGEP WWGLQGEAQA  240
SQGPPPYRKP HDLKKAWKIS LLSAVIKHLS PRFDQIRKLV WQSKRLQHKM SARDADTWSR  300
VITHEEALSR HAHRSLRLAP LEEEEEQQGA PTPRDSHADK RKRDVVVGSG EMQLSLPAEI  360
DDVVPEADRS SIDELMKLYY SCLQGTDGDG GGSDQGKDVQ EVAGAGGEEA LVHDDDDMLE  420
GLLGVAQHVV DMSDFPDSPI WRWGSSSE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-481853134131Protein ETHYLENE INSENSITIVE 3
4zds_B2e-481853134131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR04G11520.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635387.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ54e-89EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A0D9W5R20.0A0A0D9W5R2_9ORYZ; Uncharacterized protein
STRINGLPERR04G11520.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-73EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]