PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR05G16160.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 270aa    MW: 30115.6 Da    PI: 7.0343
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR05G16160.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.72e-17129190259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                      +Dg++WrKYG K++ ++efp+ YYrC ++   +C++kk v++++ + p  +++t  +eH ++
  LPERR05G16160.1 129 NDGFHWRKYGEKNILNTEFPKLYYRCGYSderKCRAKKYVQQENkKHPPEFKVTLINEHACN 190
                      7**************************998899*******9876157889999999999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-18121190IPR003657WRKY domain
SuperFamilySSF1182901.31E-18122190IPR003657WRKY domain
SMARTSM007741.0E-25128191IPR003657WRKY domain
PfamPF031061.7E-19129189IPR003657WRKY domain
PROSITE profilePS5081113.62129172IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MAMRLPKSER SPSPSSSPPP DQREAVIQEL TRGRELAALL RQQMELIPEL DRRDDALANV  60
RDISMSLRSS ISALQSERGH CGSSSGAGAA VSSVSDGGGG GGRNRKTKNR RGRHDGELIK  120
EILTTTPEND GFHWRKYGEK NILNTEFPKL YYRCGYSDER KCRAKKYVQQ ENKKHPPEFK  180
VTLINEHACN TLIPNQPSSS STSQVLDFTK ASIISSPMNP LISAPILKEE EEEVPSIDES  240
SRIMSTTMPS YEAYDYNELS PQSWDGGVWQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103110NRKTKNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR05G16160.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638351.11e-103probable WRKY transcription factor 63
TrEMBLA0A0D9WHQ70.0A0A0D9WHQ7_9ORYZ; Uncharacterized protein
STRINGLPERR05G16160.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.12e-14WRKY DNA-binding protein 67