PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR05G17110.2
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 406aa    MW: 45123.9 Da    PI: 9.1312
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR05G17110.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-094787545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     k  rr+++NReAA++sR+RKka++++Le+   +L++  ++L
  LPERR05G17110.2 47 KTLRRLAQNREAAKKSRLRKKAYVQQLENSRLKLTQLEQEL 87
                     6789************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-543112IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9444589IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-64790No hitNo description
PfamPF001706.6E-74787IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-74892No hitNo description
PROSITE patternPS0003605065IPR004827Basic-leucine zipper domain
PfamPF141442.5E-31129204IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MVYASPGTDA STDPDIDKNI RMFEQGHLPT PITSDSSDKS KGKLGQKTLR RLAQNREAAK  60
KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIIISTS GEQHLSTSGN EALNFNMEYV  120
RWLEEHNKQI NELRTAVHTH AGDDDLQNIV STIMTHHEEI FRLKSLAAKS DAVHVLSGTW  180
RTPLERCFLW LGGFRPSELL KLLVDQLEPL TEQQLANICN QQQTSQKSEE TLSQGMEAIQ  240
RSLADTVASQ LGRAGSSSSS GNTADHTAEA LEKIGAMESF LRQADDLRMQ SLQKMQRVLT  300
TRQSARALLL ASDYFSRIRA LSSLWIAREV RALLSLDWDR PLRATTASKQ IRDHAVAGAA  360
SRPRSVLFNG NCFSFPATDG ELGLVAVEAA AAAATEEKHK TNRPVG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR05G17110.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025881449.10.0transcription factor TGAL1-like isoform X1
SwissprotQ415581e-160HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D9WI320.0A0A0D9WI32_9ORYZ; Uncharacterized protein
STRINGLPERR05G17110.10.0(Leersia perrieri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-123bZIP family protein