 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
LPERR05G17730.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
|
| Family |
GRAS |
| Protein Properties |
Length: 413aa MW: 44696 Da PI: 6.9508 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| LPERR05G17730.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 274.2 | 4.2e-84 | 38 | 410 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl..fsevsPilk 92
++lLl+cA ++s+d +laq++++ l+++as++gdp+qRl++ +++AL ar r +l++ pps+ s +++++++l +++++P+++
LPERR05G17730.1 38 QQLLLHCAATLESNDVTLAQQTMWVLNNIASSHGDPNQRLTSWLLRALVARAWR---RLCAPRaPPSPPS-PWWGRAMSVTELadYVDLTPWHR 127
699***********************************************9999...5555541444444.44555666666678********* PP
GRAS 93 fshltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnv 180
f++ + N aIl+av+ ++vH++D+++++G+QWp+L++aL++Rp++ppslRiT+ + s + + e+g rL++fA++ gv++efnv
LPERR05G17730.1 128 FGFTASNAAILRAVAAVagaSAVHVVDLSVTHGMQWPTLIDALSKRPQPPPSLRITVPSVRPSApplLAVPTDELGLRLSNFAKSKGVHLEFNV 221
***********987543333************************************9877555567889999********************** PP
GRAS 181 l...vak.rledl..eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+ +++ l+++ ++ +L ++ gEa++Vn++ + ++ ++ rd++L++v+ l+P++v+v++++ad++s+s+++r++ ++++++ l+
LPERR05G17730.1 222 VehaTSSpPLAAVlsDPTSLGIRDGEAVIVNCQSWMRHVA------PESRDAFLDAVRALRPRLVTVTDEDADLDSPSLAARMAGCFNFHWILL 309
9644222334444679******************999997......555899****************************************** PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
d+l++ +p++s r+ E++ +gr+i++v++ g++ er e+ ++ er+++ GF v ++e aa ++++ll++++ g+ v+ e++ +vl+W
LPERR05G17730.1 310 DALDMAAPKDSPRRMEQEAA-IGRKIESVISDDGDA--ERPESGARLGERMRRRGFAGVGFDEVAAGDVRRLLSEHA-TGWGVKREEDMMVLTW 399
**************999999.**************9..***************************************.99************** PP
GRAS 363 kdrpLvsvSaW 373
k++ v++SaW
LPERR05G17730.1 400 KGHGAVFTSAW 410
*********** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MNMEPELRGG GGCGVRAAAH GSSFCFSGGV VVDGPRIQQL LLHCAATLES NDVTLAQQTM 60
WVLNNIASSH GDPNQRLTSW LLRALVARAW RRLCAPRAPP SPPSPWWGRA MSVTELADYV 120
DLTPWHRFGF TASNAAILRA VAAVAGASAV HVVDLSVTHG MQWPTLIDAL SKRPQPPPSL 180
RITVPSVRPS APPLLAVPTD ELGLRLSNFA KSKGVHLEFN VVEHATSSPP LAAVLSDPTS 240
LGIRDGEAVI VNCQSWMRHV APESRDAFLD AVRALRPRLV TVTDEDADLD SPSLAARMAG 300
CFNFHWILLD ALDMAAPKDS PRRMEQEAAI GRKIESVISD DGDAERPESG ARLGERMRRR 360
GFAGVGFDEV AAGDVRRLLS EHATGWGVKR EEDMMVLTWK GHGAVFTSAW MPN
|
