PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR05G22990.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family WRKY
Protein Properties Length: 325aa    MW: 35301.5 Da    PI: 5.8431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR05G22990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.12.8e-26158216259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YY+C+s   C+++k vers e p v++itY  +H h 
  LPERR05G22990.1 158 TDLWAWRKYGQKPIKGSPYPRGYYKCSSLkACMARKMVERSPEKPGVLVITYIADHCHA 216
                      699************************9989*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081128.116152218IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-26153218IPR003657WRKY domain
SuperFamilySSF1182902.75E-23155218IPR003657WRKY domain
SMARTSM007741.1E-30157217IPR003657WRKY domain
PfamPF031063.0E-21159215IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MEFSNDWDLQ AVVRSCGTAI ADDSEAASRR AEIAVVGRRA AAPEFVGKPV RSSSSAAASY  60
YDLEYLDLYH ELPRAPFMVT PSSATASLEE QQRREADHEV IISFPAASTS GQGQQLIPAR  120
KQPGRKPGLR TPRPKRSKKS QLKKVVCEVP VADGGVSTDL WAWRKYGQKP IKGSPYPRGY  180
YKCSSLKACM ARKMVERSPE KPGVLVITYI ADHCHAVPTQ LNSLAGTTRN NKPALSSSPV  240
DDHHHNHQLP SPGGGATTSA DEAAAAKDSG GETCSMADDE MNDDLIWAPV EMEMDDFFGP  300
FDDDLDHFLD DDVDGGALLG RRLSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-17139219280Disease resistance protein RRS1
5w3x_D1e-17139219280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR05G22990.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638808.11e-141WRKY transcription factor 22-like
TrEMBLA0A0D9WKA50.0A0A0D9WKA5_9ORYZ; Uncharacterized protein
STRINGLPERR05G22990.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42793070
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-36WRKY family protein