PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR06G23220.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 130aa    MW: 14430.2 Da    PI: 6.5282
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR06G23220.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.83.2e-1581129351
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                      +++r++r+++NRe+A rsR+RK+a++eeLe++v  L   N  Lkk+ +e
  LPERR06G23220.1  81 DDRRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCKE 129
                      589*************************************888877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-1379129No hitNo description
SMARTSM003382.0E-479129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.64581130IPR004827Basic-leucine zipper domain
PfamPF001709.5E-1382129IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-1183129No hitNo description
CDDcd147079.75E-1683130No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MENYHQFQMA AAWPREPDSP QLSIMSGCSS LFSISTLRDD DGGGGGGGGH AIPATPVSLA  60
VIATGDEVEM EVRQQSGGSG DDRRTIRMMR NRESALRSRA RKRAYVEELE KEVRRLVDDN  120
LNLKKQCKEY
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR06G23220.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2431441e-83AK243144.1 Oryza sativa Japonica Group cDNA, clone: J100032B03, full insert sequence.
GenBankCT8347451e-83CT834745.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103J07, full insert sequence.
GenBankCT8347461e-83CT834746.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110D03, full insert sequence.
GenBankCT8347471e-83CT834747.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126G01, full insert sequence.
GenBankCT8347481e-83CT834748.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223H09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642449.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643092.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643093.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643094.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643106.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015643107.12e-69ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
TrEMBLA0A0D9WU831e-91A0A0D9WU83_9ORYZ; Uncharacterized protein
STRINGLPERR06G23220.12e-92(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.18e-07ABA-responsive element binding protein 3