PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G06120.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 386aa    MW: 40000.9 Da    PI: 6.6859
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G06120.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_178.39.2e-25261323163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL++eN+aL++el++lkk ++++++e+
  LPERR07G06120.1 261 ERELKRERRKQSNRESARRSRLRKQQECEELTRKVAELTTENSALRSELDQLKKACEEMEAEN 323
                      89*********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165964.2E-8128238No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-17259320No hitNo description
PfamPF001704.8E-22261323IPR004827Basic-leucine zipper domain
SMARTSM003387.0E-22261325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.599263326IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-11264319No hitNo description
CDDcd147023.85E-21266316No hitNo description
PROSITE patternPS000360268283IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MASSSDEQPK PPEPPAVAAA VAAGTAVAAA PTHAEWAASL QAYYAAAGHP YAWPAQHLMA  60
AAAAGAPYGA PVPFPMYHPG AAAAYYAHAS MAAGVPYPTA EAVAAAAAAG AVPEGKGKGK  120
GAGTSPEKGS SAAPSGDDAS RSGDSGSEES SDTRDDDTDH KDSNAPKKRK SGNTSAEGEP  180
SQAAVVPYAA LESPFQLKGR SASKLPVSAP GRAALPNATP NLNIGIDLWS ASPALAVPAA  240
QGEASPGLAL ARRDGAGQLD ERELKRERRK QSNRESARRS RLRKQQECEE LTRKVAELTT  300
ENSALRSELD QLKKACEEME AENTRLMGDK AAQYQGPTVT TTLGMSIDSS KTQHHDDEGQ  360
FHKKNTNNNT NGNYVGSSHK PEANSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277283RRSRLRK
2277284RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G06120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2891790.0AK289179.1 Oryza sativa Japonica Group cDNA, clone: J100028J17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159000.10.0DNA-binding protein EMBP-1-like isoform X2
SwissprotP250328e-65EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A0D9WWS30.0A0A0D9WWS3_9ORYZ; Uncharacterized protein
STRINGLPERR07G06120.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-23basic region/leucine zipper transcription factor 16