PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G06380.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 377aa    MW: 41436.2 Da    PI: 9.1458
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G06380.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN335.52e-1171201167291
                      --HHHH---S--HHHHHHT--TT--.......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTT CS
             EIN3 167 gvepPWWPtGkelwwgelglskdqg......tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqee 254
                      g +p+WWPt +e wwg+  +++         + p+   + l ka kv+vL a +kh++p       + +      ++ +  es ++ s l++e+
  LPERR07G06380.1  71 GEAPAWWPTAREPWWGTEVAAHMAMaatttpPVPFAAARRLTKAEKVAVLVAAVKHAAPPDF---ACSLAAAAARSRLTHAESTVWESALRRER 161
                      5689***********97653332223455567799**********************98733...3556667778899************9998 PP

                      T-S--XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3 255 kecatvsahss...slrkqspkvtlsceqkedvegkkesk 291
                      +     ++ ++   +  ++ p vtl ++ ++d  g+   +
  LPERR07G06380.1 162 ERHVATMPPPRggeKKPEDVPLVTLLDRRDDDHSGDLSGE 201
                      7655555555543333336777888888777777544433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1167681.83E-2043164IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.102.6E-1946166IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048735.0E-871159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MAGNSSSRKR ASSSSSSNHH HQHQPKRRRC TPGDGGGGVP LAVALWGMRG RTLERMVTQL  60
ARRPWGGNGG GEAPAWWPTA REPWWGTEVA AHMAMAATTT PPVPFAAARR LTKAEKVAVL  120
VAAVKHAAPP DFACSLAAAA ARSRLTHAES TVWESALRRE RERHVATMPP PRGGEKKPED  180
VPLVTLLDRR DDDHSGDLSG EAAAAAAAAA EEDVDWFDCD ELYRGMAKLE IPSFFGGYGK  240
ISALCLSPKS STVIHHNLPI GLLPLRFCLG SGNGWVAIYL QTLGQYLDIS LMNLFTGQNI  300
PFHCFPKNLE FLYDPSHYPF PKSSRLCLRP TQRRVYCLTR GGDVHILRLP TDCNCRRQRT  360
VSFEPLFDKS SMEFYPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1728RKRASSSSSSNHHHQHQPKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G06380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9WWV60.0A0A0D9WWV6_9ORYZ; Uncharacterized protein
STRINGLPERR07G06380.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988