PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G23570.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 550aa    MW: 60638.5 Da    PI: 5.1218
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G23570.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34641e-141724561353
                      XXXXXXXXXXXXXXXXXXXXXXX...XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqll.edkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                      eel++rmw+d++++krlke + +   ++  +++   + n+s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv+gasd+Lr+
  LPERR07G23570.1  72 EELERRMWRDRVRHKRLKELQTSGGaGRPAPEIAGGRRNQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVSGASDNLRS 165
                      8******************9888550445566888899******************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
             EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                      WWk+kv+fdrngpaai+k q++ ++ s +++  ++++   +sl+ lqDTtlgSLLsalmqhcdppqrrfplekg +pPWWP+Gke+ww+e+g++
  LPERR07G23570.1 166 WWKDKVRFDRNGPAAIAKFQSAAAADSVNDNGAVNSTGGDSSLHSLQDTTLGSLLSALMQHCDPPQRRFPLEKGAPPPWWPEGKEDWWAEAGVP 259
                      *******************99999999999999999********************************************************** PP

                      TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXXXX CS
             EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtlsc 278
                      ++ g+ppykkphdlkkawkv+vLtavikhmsp++e++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++    ++       +  ls 
  LPERR07G23570.1 260 AQLGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVEKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGaclPPPPPAPLSAAELSI 353
                      ***************************************************************************9876445455777888888 PP

                      XXXXXXX..XXXXXX.XXXXXXXXXX...........................XXXXXXXXXXXXXX.XXXXXXX......XXXXXXX.XXXXX CS
             EIN3 279 eqkedve..gkkeskikhvqavktta...........................gfpvvrkrkkkpse.sakvsskevsrtcqssqfrgseteli 342
                      + ++dv   g++e    + q+v+                              ++++++kr ++p   + +  +++ ++tc++ q+++s+++l+
  LPERR07G23570.1 354 SGEYDVVdaGDDEDG--NLQKVSPPFmdltaidnkfmimpaaatemmmkeeaiDVEFIQKRSAPPPPpPVAGGENGRVYTCENVQCPRSNYALG 445
                      888998855444444..67777765588999999****************************9876515566788999**************** PP

                      XXXXXXXXXXX CS
             EIN3 343 fadknsisqne 353
                      f d+n+++ ++
  LPERR07G23570.1 446 FLDRNERNAHQ 456
                      ********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048739.1E-12572326No hitNo description
Gene3DG3DSA:1.10.3180.103.6E-69206335IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.22E-57207329IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGMTMVDRRM APFAAEADHN NKEAFGFFSA AAGECFVGEN DLVNTAPPPP QIFAGGEEDD  60
DDDADAELDD IEELERRMWR DRVRHKRLKE LQTSGGAGRP APEIAGGRRN QSQEQARRKK  120
MSRAQDGILK YMLKMMEVCN AQGFVYGIIP ENGKPVSGAS DNLRSWWKDK VRFDRNGPAA  180
IAKFQSAAAA DSVNDNGAVN STGGDSSLHS LQDTTLGSLL SALMQHCDPP QRRFPLEKGA  240
PPPWWPEGKE DWWAEAGVPA QLGPPPYKKP HDLKKAWKVA VLTAVIKHMS PDVEKVRRLV  300
RQSKCLQDKM TAKEIVTWLA VLKQEEDLYL KLHPGACLPP PPPAPLSAAE LSISGEYDVV  360
DAGDDEDGNL QKVSPPFMDL TAIDNKFMIM PAAATEMMMK EEAIDVEFIQ KRSAPPPPPP  420
VAGGENGRVY TCENVQCPRS NYALGFLDRN ERNAHQFACK HNAAGENKLF DPLAGFDFDL  480
PVDGQRCLAG LMNMYDNVMH HPQQQQQAFF IGDGVAAAPE FRFGSNLNVS DYGGAMQQPP  540
GKFVGSNWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-662073345132Protein ETHYLENE INSENSITIVE 3
4zds_B2e-662073345132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G23570.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLA0A0D9X3230.0A0A0D9X323_9ORYZ; Uncharacterized protein
STRINGLPERR07G23570.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-135EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]