PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR08G10230.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family ERF
Protein Properties Length: 211aa    MW: 22485.1 Da    PI: 10.5982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR08G10230.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.32.5e-102164451
              AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                     +GV+++   grW++  rd +    + r +lg+f + eeA +a++a+  
  LPERR08G10230.1 21 RGVYQRQ-PGRWAVDFRDHR---LNVRQWLGTFPSQEEALAAHDAFEA 64
                     9***999.9******99953...34********************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.7871978IPR001471AP2/ERF domain
SMARTSM003805.9E-41969IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-92068IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-112169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MRRAVASASA ATVGGKKGSL RGVYQRQPGR WAVDFRDHRL NVRQWLGTFP SQEEALAAHD  60
AFEAQVRASL AAAVPKAEID AGAGAGGAKI GHQPARRASG RKRQQKTSST ISAGAVKSTR  120
RAPRRRASGG GDKKQQKQSD DPTESSSTSA ALALEAAPAK NPFLLEDELA AEKDHRFGFG  180
LADLGHIPLP FLDGKDMDLH LTDTDLSSFF D
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR08G10230.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025875765.15e-42ethylene-responsive transcription factor ERF073
TrEMBLA0A0D9X7601e-148A0A0D9X760_9ORYZ; Uncharacterized protein
STRINGLPERR08G10230.11e-149(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140032023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.15e-09ethylene-responsive element binding protein