PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR08G16890.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 625aa    MW: 69233.6 Da    PI: 6.6452
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR08G16890.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3418.38.2e-128403771341
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel +rmwkd+++lkr+ker+++l   ++aa++++  +k ++qa rkkmsraQDgiLkYM+k mevcna+GfvYgiip+kgkpv+gasd++raW
  LPERR08G16890.1  40 EELARRMWKDKIKLKRIKERQQKLA-LQKAALEKSMAKKLSNQALRKKMSRAQDGILKYMIKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAW 132
                      8*********************976.56666*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+ +n +l +++++   +  ++hsl++lqD+tlgSLLsalmqhc+p+qr++pl+kgv+pPWWP+G+e+ww +lgl+k
  LPERR08G16890.1 133 WKEKVKFDKNGPAAIAKYDVENSMLVDAKCN---GVFNQHSLMDLQDATLGSLLSALMQHCSPQQRKYPLDKGVPPPWWPSGNEEWWVSLGLPK 223
                      **************************99988...88********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtls 277
                        +  py+kphdlkk wkv+vLt vikhm+p++++ir+++r+sk+lqdkm+akes ++l vl++eek ++++s   s+    s+ +++++ t+s
  LPERR08G16890.1 224 GMS-APYRKPHDLKKIWKVGVLTGVIKHMAPNFDKIRNRVRKSKCLQDKMTAKESLIWLGVLQREEKSFHRFSNAgSQithhSSLEGRTDDTYS 316
                      **9.8*******************************************************************9996557766666799****** PP

                      XXXXXXXXXXXXXX.XXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXX CS
             EIN3 278 ceqkedvegkkeskikhvqavkt.tagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetel 341
                      +++++dv   +e+  ++++++++  ++++vv+ r+++ s ++           qs+q+r+s+ + 
  LPERR08G16890.1 317 SSDEYDVGLLEEPPHSTSSKDDEgGRQLTVVQIREEHASGRRNKGH----HGQQSNQVRSSNEKT 377
                      ********76666656555554415577777777644333333333....335666666554332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.2E-12440288No hitNo description
Gene3DG3DSA:1.10.3180.109.9E-68165294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-59168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MDDSLAMILA EDLGDTSDFE VDGIKNLAEN DVSDEEIDAE ELARRMWKDK IKLKRIKERQ  60
QKLALQKAAL EKSMAKKLSN QALRKKMSRA QDGILKYMIK LMEVCNARGF VYGIIPDKGK  120
PVSGASDNIR AWWKEKVKFD KNGPAAIAKY DVENSMLVDA KCNGVFNQHS LMDLQDATLG  180
SLLSALMQHC SPQQRKYPLD KGVPPPWWPS GNEEWWVSLG LPKGMSAPYR KPHDLKKIWK  240
VGVLTGVIKH MAPNFDKIRN RVRKSKCLQD KMTAKESLIW LGVLQREEKS FHRFSNAGSQ  300
ITHHSSLEGR TDDTYSSSDE YDVGLLEEPP HSTSSKDDEG GRQLTVVQIR EEHASGRRNK  360
GHHGQQSNQV RSSNEKTTES RKRKKTSGHF STVESEVEVT QINGNPPEIV SNALPYTGRI  420
NQTEMLGMAN QMTNLSHINN TSGTLQHQVD QGNFISSAAA VVNNYNSNQT TNIIPSSIYM  480
GVQPLACQNN DHTNPWSENT FQVNNVGPPP IGFTTNSSSV GYHTLPVQQS VPESVDAHKP  540
ITEAGMLADS TSYGYHTTAT GTGNSTSVAG DANQLVRDPF CSGTSDNFVG SSFDGLPFDF  600
IGMSSPMHDI GELLDDDDIM QYLGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-621682889129ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1380384RKRKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR08G16890.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015696239.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
SwissprotO231161e-136EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0D9X9L60.0A0A0D9X9L6_9ORYZ; Uncharacterized protein
STRINGLPERR08G16890.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-135ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]