PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR08G19600.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 140aa    MW: 15281.1 Da    PI: 10.0509
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR08G19600.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16e-1656109558
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      kr rr++kNRe+A rsR+RK+a+++eLee+   L aeN +L+++  +lk  +ak
  LPERR08G19600.1  56 KRKRRAMKNRESAERSRARKQAYLQELEEELRLLRAENAQLRDQCHQLKAAAAK 109
                      9***********************************************998886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-852116IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.57654104IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-1256108No hitNo description
PfamPF001704.9E-1356108IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.57E-1156106No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MERAGSGGAG AGDAATIMST AAVAPAARRQ LEHELLYRAE LHQQQQESRG GGRVEKRKRR  60
AMKNRESAER SRARKQAYLQ ELEEELRLLR AENAQLRDQC HQLKAAAAKA AEAEAAAAEQ  120
QEAAAAMEAP TLKRTLSATF
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR08G19600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015649649.14e-32protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A0D9XAL02e-89A0A0D9XAL0_9ORYZ; Uncharacterized protein
STRINGLPERR08G19600.13e-90(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151931719