PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR09G10870.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family EIL
Protein Properties Length: 616aa    MW: 68816.9 Da    PI: 6.3351
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR09G10870.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3419.73.2e-128384171353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      ++l +rmwkd+++l+r+ker+ +l    +a+++++k + +++qa rkkmsra DgiLkYMlk mevc a+GfvYgiip+kgkpv+gasd++raW
  LPERR09G10870.1  38 DDLARRMWKDRVKLRRIKERQHKLA-LVQAELDKSKPKLISDQAMRKKMSRAHDGILKYMLKLMEVCHARGFVYGIIPDKGKPVSGASDNIRAW 130
                      699******************9966.55566*************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fd+ngpaai+ky+++nl++ ++ s+   + +++hsl++lqD+tlgSLLs+lmq c+ppqr+fpl+kg++pPWWP+G+e+ww +lgl+ 
  LPERR09G10870.1 131 WKEKVKFDKNGPAAIAKYESENLASVDAPSS---GIKSQHSLMDLQDATLGSLLSSLMQNCNPPQRKFPLDKGTPPPWWPSGNEDWWIALGLPV 221
                      ************************9988888...88********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.....XXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.....slrkqspkvtls 277
                       q  ppykkphdlkk+wkv+vLt vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++ +   +s        + ++  tls
  LPERR09G10870.1 222 GQI-PPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLIHCIDNGMSevtqhLALEYRNGDTLS 314
                      999.9****************************************************************9888885535554333489999*** PP

                      XXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XX CS
             EIN3 278 ceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgset 339
                      +++++dv+g ++   ++++ +++++                                g++   krk kp ++ +v ++ev    q++    +++
  LPERR09G10870.1 315 SSNEYDVDGFEDAPLSTSSRDDEQDlspaaqlseepaptrreranvkrpnqvvpkkaGTKEPPKRK-KPCHNVTVIEHEV----QRADDAPENS 403
                      ********8887777988888888899****************************99999999999.6666666666655....4444445678 PP

                      XXXXXXXXXXXXXX CS
             EIN3 340 elifadknsisqne 353
                      + +++d+n+++q e
  LPERR09G10870.1 404 RSMIPDMNRLDQVE 417
                      99999*99999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.8E-12338286No hitNo description
Gene3DG3DSA:1.10.3180.103.0E-68160291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.02E-60166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    Send to blast
MDHLAIIATE LGDSLDFEVD GIQNLTENDV SDEEIEVDDL ARRMWKDRVK LRRIKERQHK  60
LALVQAELDK SKPKLISDQA MRKKMSRAHD GILKYMLKLM EVCHARGFVY GIIPDKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYES ENLASVDAPS SGIKSQHSLM DLQDATLGSL  180
LSSLMQNCNP PQRKFPLDKG TPPPWWPSGN EDWWIALGLP VGQIPPYKKP HDLKKVWKVG  240
VLTGVIKHMS PNFDKIRNHV RKSKCLQDKM TAKESLIWLG VLQREERLIH CIDNGMSEVT  300
QHLALEYRNG DTLSSSNEYD VDGFEDAPLS TSSRDDEQDL SPAAQLSEEP APTRRERANV  360
KRPNQVVPKK AGTKEPPKRK KPCHNVTVIE HEVQRADDAP ENSRSMIPDM NRLDQVEMPG  420
MANQITSFNK EGNTSEALQH RGNTQELAHL PVTNFNHYLS AQATDATPVS ICVGGQSVPY  480
EISDNSRPKT GNIFPLDSDS GFNNLPSSYQ TIPPKQSLPL SMMDHHVVPM GIRTPADNSP  540
YVDQIIGSGN STSVPGDMQL IDYPFYGEQD KFAGSLGCDT SWCLFLSSIL SLGYHLNLSM  600
EGYTFFVLPS NINLDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A5e-631662909133ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR09G10870.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1087580.0AC108758.2 Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence.
GenBankAK0659790.0AK065979.1 Oryza sativa Japonica Group cDNA clone:J013047J08, full insert sequence.
GenBankAP0149650.0AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612094.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_015612095.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-142EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0D9XF380.0A0A0D9XF38_9ORYZ; Uncharacterized protein
STRINGLPERR09G10870.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-145ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]