PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR11G11610.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family NAC
Protein Properties Length: 99aa    MW: 11051.6 Da    PI: 8.9134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR11G11610.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.66.9e-0839775189
              NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
                     ++++++e y F+++++k++ +kr+nr++ +g W++ g+d
  LPERR11G11610.1 39 AQEKKNEKYLFTRKENKNPGDKRQNRTAGNGLWRSVGSD 77
                     45567799***************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-63977IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MAGHGDCITL VNDSTMHLPL WSKFCPTEVL CWVGDEGVAQ EKKNEKYLFT RKENKNPGDK  60
RQNRTAGNGL WRSVGSDLHE KAVLPRSSSL LHLAMQGKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR11G11610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D9XSD72e-68A0A0D9XSD7_9ORYZ; Uncharacterized protein
STRINGLPERR11G11610.13e-69(Leersia perrieri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-06vascular related NAC-domain protein 7