PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR12G15130.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 339aa    MW: 36062.3 Da    PI: 9.7098
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR12G15130.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.49.9e-16154209459
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                       kr+rr+ +NRe+ArrsR+RK+a +  Le  v +L +eN +L+k l  ++++++  
  LPERR12G15130.1 154 AKRTRRMLSNRESARRSRKRKQAHLTDLESQVSQLRSENASLQKSLADMSQKYKHS 209
                      79*****************************************6666666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-18151215IPR004827Basic-leucine zipper domain
PfamPF001703.1E-13153207IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-13153207No hitNo description
PROSITE profilePS5021711.771153216IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-12155206No hitNo description
CDDcd147021.78E-19156206No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
PfamPF124982.9E-16222320IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MLQVPLPSFQ FSPIPLPPFF PIAVAKFSLK KKKSSSATGG GKGGAFTRMK TGGGDPGAYA  60
VVLKTKLDLY CAAVAKSMEA KSQESSLGYL NSQASDTSQL VSQASFNGYG STGVTNSNGI  120
HNDDDQGKPA NSGTSKELSE DDGDLEENID PANAKRTRRM LSNRESARRS RKRKQAHLTD  180
LESQVSQLRS ENASLQKSLA DMSQKYKHST TENSNLRADL NTMRRKVNIA EEAVRRVSGT  240
GLLLFTTSET PASSIPFSSG LSDAASAATA AAALMEDDWA NSSLPDEAIP VPSAAMVSTS  300
PSMRRVASLE RLQKRIRGDV VHSEAASTLS VPEVVGSDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167173RRSRKRK
2167174RRSRKRKQ
3169174SRKRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR12G15130.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664716.11e-155PREDICTED: light-inducible protein CPRF2-like
TrEMBLA0A0D9Y1690.0A0A0D9Y169_9ORYZ; Uncharacterized protein
STRINGLPERR12G15130.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.27e-31bZIP family protein