PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR12G16690.1
Organism
Leersia perrieri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 150aa    MW: 16100.6 Da    PI: 12.4409
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR12G16690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.72.1e-124793349
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                     +++r rr+++NRe+ArrsR+RK+  ++eL+ k+++L a N+ L+ +l
  LPERR12G16690.1 47 RRRRLRRRISNRESARRSRARKQRHLDELRGKAAALRAGNRCLAARL 93
                     6799************************************9999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-743109IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-74393No hitNo description
PfamPF001701.2E-84793IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.5424793IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-84993No hitNo description
PROSITE patternPS0003605267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MATLPFLSDS ALEEFLADIG FGIPSSPPAS SSPATSAAAP ATEEEMRRRR LRRRISNRES  60
ARRSRARKQR HLDELRGKAA ALRAGNRCLA ARLRGAAARA ALVSLANARL RAEAAALSRR  120
LAAARRALAI RRLYAAASAA EMRTLASLIA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16168RRSRARKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR12G16690.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152293.16e-22ocs element-binding factor 1-like
TrEMBLA0A0D9Y1S31e-90A0A0D9Y1S3_9ORYZ; Uncharacterized protein
STRINGLPERR12G16690.12e-91(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP151251919