PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lj0g3v0050669.1

Organism

Lotus japonicus

Taxonomic ID

34305

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

SAP

Protein Properties

Length: 83aa MW: 9123.7 Da PI: 7.3425

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj0g3v0050669.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	60.3	3e-19	1	42	40	81
SAP 40 anevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81 +nevwpeP++e latqva+d+++++Grlaaas+la+vfqv+s Lj0g3v0050669.1 1 MNEVWPEPVVELLATQVATDSAHYHGRLAAASSLAIVFQVTS 42 79**************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 83 aa Download sequence Send to blast
MNEVWPEPVV ELLATQVATD SAHYHGRLAA ASSLAIVFQV TSLSSPSSSC CIPCYLVSFS 60 IFVFFFFIFV KVRSVVKYLI IGS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj0g3v0050669.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP008952	1e-139	AP008952.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT45D07, TM0932b, complete sequence.

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7687	31	46