PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0119889.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family ERF
Protein Properties Length: 234aa    MW: 26060.1 Da    PI: 5.1711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0119889.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.12.2e-0868116355
              AP2   3 ykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+ +++ +++W+A+    ++ ng      lg f t+eeAaka++ a  +++g
  Lj0g3v0119889.1  68 YTGIKRNS-QNKWEAR---LKNsNG-MPALDLGVFNTEEEAAKAYDVAVTRWRG 116
                      99**9887.9******...666566.7999******************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.7E-6333IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-1067120IPR001471AP2/ERF domain
SMARTSM003804.4E-567127IPR001471AP2/ERF domain
PROSITE profilePS5103213.55167126IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-968119IPR016177DNA-binding domain
PfamPF008471.5E-468116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MFAGAFASET KAARAHDLIS IKMRGDSAKT NFLANSYMED ISKMKTMSVD DCILSLRRDK  60
KKAKSASYTG IKRNSQNKWE ARLKNSNGMP ALDLGVFNTE EEAAKAYDVA VTRWRGRNSD  120
DNGNNPRDVM ERKMFPNHEE ISSSFPIEQI MNDYVASSNT FFVDGLNGGG AEFGIEENNF  180
CGYGGISTFP DLDATVEESM FIPALESQAL QAFQNNQKLF DKKNPSPSFL SNYC
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0119889.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2265022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.19e-24AP2 family protein