PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0161989.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 179aa    MW: 20835.4 Da    PI: 8.8743
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0161989.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.5e-0881126550
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                      ++ rr+++NRe+ArrsR RK+  +e+L++   +   eN++L ++l+
  Lj0g3v0161989.1  81 RKRRRMISNRESARRSRVRKQRHLENLRNQLNKCRMENRELNNRLQ 126
                      5789***********************************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-875126No hitNo description
SMARTSM003381.6E-877141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.24379142IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-981129No hitNo description
CDDcd147022.07E-1582129No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MLSAILPSDP LLSNPFSAFA GGFTPPWDCH DDPLSDYLKP STEPKPVTSS SGSGGPILTH  60
EKRKPDPDEP DQSAEPVIDE RKRRRMISNR ESARRSRVRK QRHLENLRNQ LNKCRMENRE  120
LNNRLQFILY HLNRVRTENE WLRSERTVLQ ERISEYAQIL VLQQLQPSFS TAWNCNLTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16183KRKPDPDEPDQSAEPVIDERKRR
28084RKRRR
39399RRSRVRK
493100RRSRVRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.117421e-107root
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0161989.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003608557.12e-83basic leucine zipper 4
TrEMBLG7JF855e-82G7JF85_MEDTR; BZIP transcription factor
STRINGAES907549e-83(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.26e-30basic leucine-zipper 6