PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0205019.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family G2-like
Protein Properties Length: 186aa    MW: 21511.1 Da    PI: 7.742
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0205019.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.51.7e-292075155
          G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmk.vkgLtlehvkSHLQkYRl 55
                     +prlrWt +LHe+Fveave+LGG++kAtPk+il+lm+ vkgL ++h+kSHLQ+YR 
  Lj0g3v0205019.1 20 QPRLRWTLDLHEHFVEAVESLGGKQKATPKRILQLMNnVKGLRISHIKSHLQMYRN 75
                     59**********************************549****************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-271775IPR009057Homeodomain-like
SuperFamilySSF466892.33E-131975IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-212175IPR006447Myb domain, plants
PfamPF002493.3E-82274IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MKNCSTRNGG DTRKYHKSEQ PRLRWTLDLH EHFVEAVESL GGKQKATPKR ILQLMNNVKG  60
LRISHIKSHL QMYRNVKGRR HTMYELQKEN AQVSDLPICS RSSLRTKLSV SKYETDYDLN  120
QEPESSACLL SDISNDEEES SRTMKFLDER MMHSDHERMH TEDNHVVDSS SVQTHGSNSI  180
NLDLAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-162079260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0205019.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028247156.12e-62probable transcription factor KAN4
TrEMBLA0A371H3E96e-65A0A371H3E9_MUCPR; Putative Myb family transcription factor (Fragment)
STRINGGLYMA08G41735.16e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-25G2-like family protein