PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0268559.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 238aa    MW: 26363.4 Da    PI: 7.0193
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0268559.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.6e-08871241350
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                      NReA r++R +Kka ++ Lee+vk+L   N++L  +l+
  Lj0g3v0268559.1  87 NREAVRKYRDKKKAHTAYLEEEVKKLRLVNQQLMRKLQ 124
                      *********************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-1273142No hitNo description
SMARTSM003385.0E-678142IPR004827Basic-leucine zipper domain
PfamPF077165.9E-1186132IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-686124No hitNo description
CDDcd146861.66E-1187134No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDDGNAALSD KLSDNVLFSN PEPSNKVHAS TSVNTDTVTE LSCTHTHTCN PPGPDSAHTH  60
TCYHTHTTQV FASEEDTNSK PKTASGNREA VRKYRDKKKA HTAYLEEEVK KLRLVNQQLM  120
RKLQGQALLE AELSRLRNTL TTLKGKIDSE LGSFPFQNKC SSSTFVKRDA VFPCFHQHGV  180
SSSRVNVCAC GKSMMMPWEG NCQPEIVDCQ VDTNNMTCTE GQTRDTMDKF MPSASQDG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.18570.0root
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0268559.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007149027.11e-113hypothetical protein PHAVU_005G034400g
RefseqXP_007149028.11e-113hypothetical protein PHAVU_005G034400g
TrEMBLV7BWT31e-112V7BWT3_PHAVU; Uncharacterized protein
STRINGXP_007149027.11e-113(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25673277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51960.16e-39basic leucine zipper 24