PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0275009.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 144aa    MW: 16683.8 Da    PI: 7.0446
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0275009.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-1159106555
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      ++ rr+q+NRe+ArrsR RKk  +e+L++    L  eN++Lk   ++l+ +
  Lj0g3v0275009.1  59 RKIRRMQSNRESARRSRWRKKRHLENLTNQLNRLRIENRELK---NRLTST 106
                      789***************************************...555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.1E-1055119IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.26657103IPR004827Basic-leucine zipper domain
PfamPF001701.5E-858104IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.58E-1159112No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-859105No hitNo description
CDDcd147021.59E-1460110No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MLFQDEEAVQ FSCPMVHEAM FTSSEIEELF SLINQPDDPS SPGSGSQGSN RAVYSAQERK  60
IRRMQSNRES ARRSRWRKKR HLENLTNQLN RLRIENRELK NRLTSTVHHH LLLSVENECL  120
ISESMTLMAE LSDPCQISST MFSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0275009.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014632411.13e-65basic leucine zipper 4
RefseqXP_028234281.13e-65basic leucine zipper 4-like
TrEMBLA0A1J7IS282e-64A0A1J7IS28_LUPAN; Uncharacterized protein
STRINGGLYMA06G05111.11e-64(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.23e-14basic leucine-zipper 6