PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0280689.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 209aa    MW: 23669.3 Da    PI: 7.5034
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0280689.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_161.71.4e-19146206363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++++er++q+NRe+A+rsR+RK++e++eL + +++L+++Nk+L ++l +l++e+++l +e+
  Lj0g3v0280689.1 146 QIRKERKRQSNRESAKRSRLRKQQECDELYQNIDTLKGKNKSLTEQLRSLSEECEALINEN 206
                      689****************************************************998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-13142202No hitNo description
SMARTSM003383.4E-14143208IPR004827Basic-leucine zipper domain
PfamPF001701.0E-16146206IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174146209IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10147203No hitNo description
CDDcd147028.60E-17149199No hitNo description
PROSITE patternPS000360151166IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MATEESNDIG TPCKSVVPQD ETQNRPLLPD WTRMQAYYNP GSTQIPLLNP HATGSYLYHH  60
MTPNQDAALV FSQKVHQNFG KRNLDSKNNC AGNRDGMSMK DFSSTMNQQF NMVLGNENST  120
VFNHNLGTGL NASSISAQLT KLEADQIRKE RKRQSNRESA KRSRLRKQQE CDELYQNIDT  180
LKGKNKSLTE QLRSLSEECE ALINENDSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0280689.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006605461.12e-52G-box-binding factor 1 isoform X1
RefseqXP_006605462.12e-52G-box-binding factor 1 isoform X1
RefseqXP_025983085.12e-52G-box-binding factor 1 isoform X1
RefseqXP_028221189.12e-52G-box-binding factor 1-like isoform X1
TrEMBLA0A371GY556e-54A0A371GY55_MUCPR; G-box-binding factor 1 (Fragment)
STRINGGLYMA20G01030.17e-52(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF149401013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.23e-21G-box binding factor 1