PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0327669.2
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family LBD
Protein Properties Length: 81aa    MW: 9364.96 Da    PI: 10.2248
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0327669.2genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26037.75.9e-12841134
           DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvh 34
                     +CaaCk+lrr+ +++Cvlapyf +++p+kfanv 
  Lj0g3v0327669.2  8 PCAACKILRRSSTQNCVLAPYFTEHEPHKFANVD 41
                     7******************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508919.476781IPR004883Lateral organ boundaries, LOB
PfamPF031952.2E-10841IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    Send to blast
MESGRNSPCA ACKILRRSST QNCVLAPYFT EHEPHKFANV DTNAIKMLLE LNLGRKRIKS  60
LQHELLWRKG KDLSVQMREL L
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0327669.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.11e-14LOB domain-containing protein 4