PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0336749.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family CPP
Protein Properties Length: 137aa    MW: 15352.4 Da    PI: 6.8684
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0336749.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR21.45e-0797134541
              TCR   5 gCnCkkskClkkYCeCfaagkkCseeCkC.edCkNkee 41 
                      +C C    C   + +Cf  g +C+++C+C ++C N+++
  Lj0g3v0336749.1  97 PCLCAGRDCWGTFYKCFTYGFYCGQDCQCgDGCLNTHK 134
                      7****************************999***975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MESENSMQRN IKNEEGEGFR DILNEAVNQG QRTHILKTTE VKLEHKFPGC GIKDIPSKFE  60
EKLPPPDKPR IIVDNPDQST KLVPSTAAAS SKSRPLPCLC AGRDCWGTFY KCFTYGFYCG  120
QDCQCGDGCL NTHKVHE
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0336749.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0063545e-43AP006354.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT16F22, TM0349b, complete sequence.