PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0355209.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 124aa    MW: 14232.1 Da    PI: 4.5301
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0355209.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.11.9e-151797182
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka.eekewyfFskrdkkyatgkrknratksgy 82
                     l pG+ F+Ptd+ lv +yL+++v +++l++ ++i+++d++++ePw Lp    k    +e++++f+ + d+  ++  + +r++ sg 
  Lj0g3v0355209.1 17 LLPGYMFDPTDDVLVEFYLTRRVFAQRLPV-QIIPDFDVFQTEPWGLPgGdgK--IfNERKIFFYNTMDRDLEN--NDERVAGSGH 97
                     579***************************.89***************53333..2367899999999998765..6677777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.49E-1914117IPR003441NAC domain
PROSITE profilePS5100518.64217124IPR003441NAC domain
PfamPF023651.9E-61997IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MEDLVMTYED DDGTVRLLPG YMFDPTDDVL VEFYLTRRVF AQRLPVQIIP DFDVFQTEPW  60
GLPGGDGKIF NERKIFFYNT MDRDLENNDE RVAGSGHLRV IEKGKCVPIP GNNEVKGACA  120
RRTK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-17101078105Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj0g3v0355209.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027352865.18e-36NAC domain-containing protein 83-like
TrEMBLA0A371E4A16e-25A0A371E4A1_MUCPR; NAC domain-containing protein 41 (Fragment)
STRINGXP_004492996.11e-22(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134131127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-17NAC domain containing protein 83