PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v0463790.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bHLH
Protein Properties Length: 206aa    MW: 23691.3 Da    PI: 7.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v0463790.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.5e-122472555
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     h e E++RR+++ +   +Lr+llP       ++K s ++ + +A++YI++Lq
  Lj2g3v0463790.1 24 HRETEKQRRQEMGKLCTTLRSLLPLeY---IKGKRSTSDHVNEAINYINHLQ 72
                     99***********************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.77E-121776No hitNo description
SuperFamilySSF474593.79E-161894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.6681971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-112292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-92472IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-52577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MLIWEKKIIN KKIAMDDENK KWIHRETEKQ RRQEMGKLCT TLRSLLPLEY IKGKRSTSDH  60
VNEAINYINH LQNKVKQLQY KRDKLMKEVP NLHTTTGPEN ECSPTHLQPF VIVHPFPGGV  120
EIVCSYSLKC VFPLSRVLDI LLKEGLDVVS STSTKIDERF IHTIISEDPS HLNILDTDYS  180
DQLQRKLTEA ISSTGVGETL PEPQIC
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v0463790.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017439389.19e-89PREDICTED: transcription factor bHLH36-like isoform X2
TrEMBLA0A0S3TB412e-87A0A0S3TB41_PHAAN; Uncharacterized protein
STRINGGLYMA16G32610.34e-86(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.15e-36bHLH family protein