PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v0740680.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family ERF
Protein Properties Length: 101aa    MW: 11641.2 Da    PI: 10.7611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v0740680.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.55.2e-1163101244
              AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAak 44 
                       ++GVr++  +g++ AeIrd +     r  r +lg+f+ ++eAak
  Lj2g3v0740680.1  63 IFPGVRRRN-WGKYTAEIRDpF-----RgVRSWLGTFDLEKEAAK 101
                      689***877.**********66.....56**********999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.29E-1562101No hitNo description
SuperFamilySSF541713.27E-1162100IPR016177DNA-binding domain
PROSITE profilePS5103214.81663101IPR001471AP2/ERF domain
SMARTSM003805.4E-463101IPR001471AP2/ERF domain
PfamPF008471.7E-563101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-1564101IPR001471AP2/ERF domain
PRINTSPR003673.8E-66475IPR001471AP2/ERF domain
PRINTSPR003673.8E-686101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MSGSLRKSQR QGSKSKGKDS MKEENINIMK NQENSPQQNV YCEKIMEDPT PSSSKIKRKT  60
TSIFPGVRRR NWGKYTAEIR DPFRGVRSWL GTFDLEKEAA K
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v0740680.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014494298.16e-18ethylene-responsive transcription factor ERF118-like
RefseqXP_022639029.16e-18ethylene-responsive transcription factor ERF118-like
RefseqXP_022639036.16e-18ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1S3TKK21e-16A0A1S3TKK2_VIGRR; ethylene-responsive transcription factor ERF118-like
TrEMBLA0A371H9801e-16A0A371H980_MUCPR; Ethylene-responsive transcription factor ERF118 (Fragment)
STRINGGLYMA07G10116.18e-16(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1598167
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.16e-13ERF family protein