PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lj2g3v1803070.1

Organism

Lotus japonicus

Taxonomic ID

34305

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

BES1

Protein Properties

Length: 225aa MW: 24002.7 Da PI: 6.3492

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj2g3v1803070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	28.9	3.9e-09	2	55	89	145
DUF822 89 spesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145 s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d +++ llp++++ ++ Lj2g3v1803070.1 2 SACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRMDASPSS---FLLPFIRNITS 55 789***********************************99874...67777777665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.9E-6	1	40	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MSACSSIQPS PQSSSFPSPV PSYHASPTSS SFPSPTRMDA SPSSFLLPFI RNITSIPTNL 60 PPLRISNSAP VPPPLSSPRS SKRKADFEPF SNGSFNAFRH PLFATSAPSS PSRRHHVATS 120 TIPECDESDA STVDSGRWVS FQTTPASAAA APPSPTFNLV KPAIQMITPQ SSMDMNEGLP 180 WGSGAEIGRG SDFDFENGRV KPWEGERIHE VGMEELELTL GCGKA

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Lja.3378	0.0	cell culture\| pod\| protoplast\| root

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj2g3v1803070.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT141002	1e-161	BT141002.1 Lotus japonicus clone JCVI-FLLj-10N24 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016185891.1	1e-122	BES1/BZR1 homolog protein 2-like
Refseq	XP_025636219.1	1e-122	BES1/BZR1 homolog protein 2-like
Swissprot	Q94A43	5e-66	BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBL	A0A445BPQ5	1e-102	A0A445BPQ5_ARAHY; Uncharacterized protein
STRING	AES94892	1e-101	(Medicago truncatula)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1275	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	2e-41	BES1 family protein