PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v2772290.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 119aa    MW: 13381 Da    PI: 9.8826
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v2772290.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM323.5e-10126102127
              NAM 102 lkktLvfykgrapkgektdWvmheyr 127
                      +k+t+vfy+grap+g+ktdW m+ey+
  Lj2g3v2772290.1   1 MKRTMVFYNGRAPRGKKTDWKMNEYK 26 
                      8************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-11147IPR003441NAC domain
PROSITE profilePS5100518.282147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MKRTMVFYNG RAPRGKKTDW KMNEYKALQQ GGLELRQEFS LCRVYKKTKC LRAFDRRPSP  60
PIRRDIITGS SSSNPNQDDE PAQSQKGSGS THVQVMEERS VIITSSPESS PSQDGGEGE
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v2772290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027921862.12e-30NAC domain-containing protein 90-like isoform X1
TrEMBLA0A4D6MCH86e-29A0A4D6MCH8_VIGUN; Uncharacterized protein
STRINGGLYMA03G35570.16e-28(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF87134123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.26e-18NAC domain containing protein 61