PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v1014340.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 185aa    MW: 21160.5 Da    PI: 4.8745
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v1014340.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.93.1e-26221482128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       pG+  +Ptde lv++yLk++v ++ l++ ++i+++d++++ePw+Lp +  k  +++ yfF ++  +   ++   r++ sg Wk   k k+vl 
  Lj3g3v1014340.1  22 LPGYMSDPTDEVLVDFYLKRRVFAQILPV-QIIPSFDVFQIEPWRLPgEDGKIFNERKYFFYNTMGRDL-ESLDMRVAGSGLWKVVEKGKDVLI 113
                      799999***********************.89***************5544444455566666665544.57899999******9999888888 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++e++g ++tL+f++ +   +++t+W+mhe+rl
  Lj3g3v1014340.1 114 PqNNEVIGKRNTLIFWEVQGACTRRTKWMMHEFRL 148
                      758889***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-2818151IPR003441NAC domain
PROSITE profilePS5100530.12921166IPR003441NAC domain
PfamPF023651.1E-1423148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MTSFEIQENL ITYDEDGSVK LLPGYMSDPT DEVLVDFYLK RRVFAQILPV QIIPSFDVFQ  60
IEPWRLPGED GKIFNERKYF FYNTMGRDLE SLDMRVAGSG LWKVVEKGKD VLIPQNNEVI  120
GKRNTLIFWE VQGACTRRTK WMMHEFRLVL LANPSKETLL GPPSSPFPVP LPPAPPFSAP  180
PVAIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-19141488140Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v1014340.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027352865.12e-51NAC domain-containing protein 83-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134131127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-27NAC domain containing protein 83