PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj3g3v1855300.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 206aa    MW: 22737.7 Da    PI: 9.6415
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj3g3v1855300.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.31.9e-09180206531
                      CHHHCHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeL 31 
                      +r++r++kNRe+A rsR+RK a++ eL
  Lj3g3v1855300.1 180 RRQKRMIKNRESAARSRARKHAYTNEL 206
                      79**********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-8169206No hitNo description
PfamPF001702.7E-7180206IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.2E-5180206No hitNo description
CDDcd147071.10E-16180206No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MDNEGTAQAN QAAPQRQGSL SLSGALSKKT VDEVWRDIQQ NKDSEKKPRD RQPTLGEMTL  60
EDFLVKAGVV SDASSNKKND GTTAGIDPNV VVPQFPPQGQ WIPYPQPQYQ HPQQNLMGIY  120
MPSQGIAQSL HMGGCALLDV SYADNQVALP PPLMGTVSDM QIPGRKRSAP EDMVGKTVER  180
RQKRMIKNRE SAARSRARKH AYTNEL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.53461e-115floral bud| pod
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj3g3v1855300.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0102690.0AP010269.1 Lotus japonicus genomic DNA, chromosome 3, clone: LjT33A07, TM0672, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027355242.11e-116ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES36e-44AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A445JIT31e-110A0A445JIT3_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform B
STRINGGLYMA08G24340.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-38ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]