 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Lj3g3v3107620.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
|
| Family |
AP2 |
| Protein Properties |
Length: 176aa MW: 19643.5 Da PI: 5.2757 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj3g3v3107620.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 31.7 | 3.9e-10 | 145 | 174 | 1 | 35 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgk 35
s+y+GV++++++grW+++I+d + k+++lgk
Lj3g3v3107620.1 145 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGK 174
78*******************......55*****98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MLDLNLNAYS ADSTQNGDSP SQMLSEEFPE GSWNQMAESG TSNSSVVNAD GSSNEDSCST 60
RPDDSFTFQF DILKVEGATD VVTRELFPVS GGVDGGNWQV HGAASFQRPV DLSFEQVRRN 120
SEMVKMVQPH QQVKKSRRGP KSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGKDC
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT143410 | 9e-33 | BT143410.1 Lotus japonicus clone JCVI-FLLj-21N13 unknown mRNA. |
