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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Lj4g3v0768690.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
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| Family |
GRAS |
| Protein Properties |
Length: 465aa MW: 51857.1 Da PI: 6.4578 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Lj4g3v0768690.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 301.4 | 2.3e-92 | 57 | 462 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetsekn..sseelaalkl..fsevsP 89
++lL++cA+a++++d +laq++L+ l+++a pdgd++qRla+ f++AL ar a+ s++ l++++++ +++++ ++++++ +l f++++P
Lj4g3v0768690.1 57 EQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAHSFLRALTARAAKtgSCKMLVETVAVPPNNNNFtvDTHKFSVIELanFVDLTP 150
79***************************************************97677788888766666544343333444444489****** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfe 177
+++f++ +aN aIlea+eg + +Hi+D+++++++Q p+L++a+asR + pp +++T+ g + s + e+g +L +fA++ +v +e
Lj4g3v0768690.1 151 WHRFGFTAANAAILEATEGYSVIHIVDLSLTHCMQIPTLIDAIASRHdGAPPVIKLTVPGCNYSReippvLDLTHDELGAKLVNFARSRNVILE 244
***********************************************66688*****87776555678776777889***************** PP
GRAS 178 fnvl.......vakrledleleeLrvkp.........gEalaVnlvlqlhrll................desvsles..erdevLklvkslsPk 237
f+v+ a +e+Lrv++ Eal+Vn++++lh+++ ++ s r+ +Lk++++l P+
Lj4g3v0768690.1 245 FRVVsssytdgFAGL-----IEHLRVQRlihaaearaAEALVVNCHMMLHYIPeetlstsynaydsscaSS-----SmsLRSLFLKALRGLDPT 328
***955533332333.....55555555555556777****************999999999985543333.....233577************ PP
GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331
+vv+v+++ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg +r+er e+ W++r+++a F+ + +se
Lj4g3v0768690.1 329 IVVLVDEDADLTSSNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGVNRVERVERRTVWEQRMRNASFQGIGFSE 421
***************************************************.****************************************** PP
GRAS 332 kaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+ + ++k++l +++ g+ +++e++ +vl+Wk++++v++SaW
Lj4g3v0768690.1 422 DSVVEVKAMLDEHA-AGWGLKKEDEHVVLTWKGHNVVFASAW 462
**************.999************************ PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MMQFTPPLPP LHQITPIFSN PSSMNKNNQI PRNTRPWPAG FPTSKSLSSF GDANCMEQLL 60
VHCANAIETN DVTLAQQILW VLNNIAPPDG DSNQRLAHSF LRALTARAAK TGSCKMLVET 120
VAVPPNNNNF TVDTHKFSVI ELANFVDLTP WHRFGFTAAN AAILEATEGY SVIHIVDLSL 180
THCMQIPTLI DAIASRHDGA PPVIKLTVPG CNYSREIPPV LDLTHDELGA KLVNFARSRN 240
VILEFRVVSS SYTDGFAGLI EHLRVQRLIH AAEARAAEAL VVNCHMMLHY IPEETLSTSY 300
NAYDSSCASS SMSLRSLFLK ALRGLDPTIV VLVDEDADLT SSNLVCRLRS AFNYLWIPYD 360
TVDTFLPRGS KQRQWYEADI CWKIENVIAH EGVNRVERVE RRTVWEQRMR NASFQGIGFS 420
EDSVVEVKAM LDEHAAGWGL KKEDEHVVLT WKGHNVVFAS AWLPA
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP006085 | 0.0 | AP006085.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT28L24, TM0128, complete sequence. |
