PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Lj4g3v2371640.1

Organism

Lotus japonicus

Taxonomic ID

34305

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus

Family

bHLH

Protein Properties

Length: 127aa MW: 14382.6 Da PI: 9.1013

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Lj4g3v2371640.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.4	0.0003	89	111	8	30
HHHHHHHHHHHHHHHHHCTSCCC CS HLH 8 rErrRRdriNsafeeLrellPka 30 Er RR ++ + f L++ +P + Lj4g3v2371640.1 89 LERHRRLKMTQMFTHLQTTVPGL 111 7********************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence Send to blast
MHASEEAYLF FLQSSATETI SLSLSLSLVW YKMMREEAEK KESNLLQLTV MKGGYSDSAM 60 VVPPSSSAEP ISRKRGLQSD ASIAESLHLE RHRRLKMTQM FTHLQTTVPG LKPKVHLSFC 120 FNFSDLK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	95	RKRGLQSDASIAESLHLERHRRLK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Lj4g3v2371640.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14330	13	14