PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj5g3v0483800.2
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family WRKY
Protein Properties Length: 141aa    MW: 15567.4 Da    PI: 6.6251
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj5g3v0483800.2genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.32e-103323059
                     TT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY 30 agCpvkkkversaedpkvveitYegeHnhe 59
                     ++Cp+kkkv+r+++d +++  tY geHnh+
  Lj5g3v0483800.2  3 PTCPAKKKVQRCTHDRSILAATYDGEHNHS 32
                     58***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081110.028134IPR003657WRKY domain
SMARTSM007740.0014133IPR003657WRKY domain
SuperFamilySSF1182902.75E-7332IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-9332IPR003657WRKY domain
PfamPF031062.1E-7431IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MAPTCPAKKK VQRCTHDRSI LAATYDGEHN HSALDDSFRP SSSTPKGSSI ANNLSPTIIP  60
YDKEAMNNVF AISDWAQTNA RLYEDVIPQH VHGSNIKIED YISSVIKDPD FTTALAEAVA  120
HIITGQHKRQ SLNLNLDIPK E
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj5g3v0483800.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206660.14e-55probable WRKY transcription factor 40
RefseqXP_020206662.14e-55probable WRKY transcription factor 40
RefseqXP_027939733.13e-55probable WRKY transcription factor 40
TrEMBLA0A371HC054e-57A0A371HC05_MUCPR; Putative WRKY transcription factor 40 (Fragment)
STRINGXP_004498813.18e-50(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-13WRKY DNA-binding protein 40