PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj5g3v0712260.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family ERF
Protein Properties Length: 199aa    MW: 22199.2 Da    PI: 7.505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj5g3v0712260.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.22e-132574255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ykGV +  ++g+Wv+e+r p  n+k++r++lg+f  +++Aa a++ a+++++g
  Lj5g3v0712260.1 25 TYKGVKQ--RNGKWVCELRQP--NNKKARVWLGTFSHPDMAAVAYDVAALAFKG 74
                     69***76..47******9998..4478**********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.7952582IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-262583IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-172583IPR016177DNA-binding domain
SMARTSM003802.2E-232588IPR001471AP2/ERF domain
PfamPF008472.1E-82574IPR001471AP2/ERF domain
CDDcd000182.71E-212684No hitNo description
PRINTSPR003679.1E-62637IPR001471AP2/ERF domain
PRINTSPR003679.1E-66484IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MTTYMPKIQK RKAGRKKFHE TRHPTYKGVK QRNGKWVCEL RQPNNKKARV WLGTFSHPDM  60
AAVAYDVAAL AFKGDAASLN FPHAATSFPR LNSRTCSVRA IQFAAMEAAE KHFSCRDDVM  120
DEGEMIERSD KRGGSDELCL EVAGLGGDDS GRLYWDEEEV FNLPGLINSM AEGLIITPPA  180
LERGFSWAGG ETTVDLTLW
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj5g3v0712260.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006594198.11e-100dehydration-responsive element-binding protein 1D
RefseqXP_028195859.11e-100dehydration-responsive element-binding protein 1D-like
TrEMBLA0A445HGL08e-99A0A445HGL0_GLYSO; Dehydration-responsive element-binding protein 1F
TrEMBLI1LZG38e-99I1LZG3_SOYBN; Uncharacterized protein
STRINGGLYMA13G21570.11e-99(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.16e-34C-repeat/DRE binding factor 2