PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj6g3v1175110.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family ERF
Protein Properties Length: 40aa    MW: 4786.5 Da    PI: 11.616
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj6g3v1175110.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.13.8e-071838122
              AP2  1 sgykGVrwdkkrgrWvAeIrdp 22
                     s y+GVr +k +g++v eIr p
  Lj6g3v1175110.1 18 SSYRGVRKRK-WGKFVTEIRLP 38
                     68*****999.*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-81939IPR001471AP2/ERF domain
PROSITE profilePS510329.4661940IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 40 aa     Download sequence    Send to blast
MVKPNNVEKP AREQQRDSSY RGVRKRKWGK FVTEIRLPNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj6g3v1175110.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-08ERF family protein