PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj6g3v2255720.1
Organism
Lotus japonicus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family bZIP
Protein Properties Length: 175aa    MW: 20282 Da    PI: 8.2551
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj6g3v2255720.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.78.1e-1692138248
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                      + l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN +L  e
  Lj6g3v2255720.1  92 ATLQKQRRMIKNRESAARSRERKQAYTLELEALVTHLEEENAQLLRE 138
                      5799*************************************997543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.4E-1291153IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1392140IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.56593138IPR004827Basic-leucine zipper domain
CDDcd147071.75E-1795137No hitNo description
SuperFamilySSF579592.25E-1095140No hitNo description
Gene3DG3DSA:1.20.5.1707.3E-1496149No hitNo description
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MASSKVDLEQ HCSLSVSGDE IWEDIVGATD QHITLEDFLT KSVPVDTDDA TTHNKNEMYL  60
PQSANGHESA KKLVPHGRGK RRVVEEQPLD KATLQKQRRM IKNRESAARS RERKQAYTLE  120
LEALVTHLEE ENAQLLREEA DKNRLRFKQL MECLIPVVEK RKPRQMLRRV NSVQW
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj6g3v2255720.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1488990.0BT148899.1 Lotus japonicus clone JCVI-FLLj-6I8 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027355110.14e-57G-box-binding factor 4-like
TrEMBLI3T8511e-126I3T851_LOTJA; Uncharacterized protein
STRINGXP_008449422.14e-48(Cucumis melo)
STRINGXP_004158618.13e-48(Cucumis sativus)
STRINGGLYMA08G19590.21e-48(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-36bZIP family protein